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Lexogen QuantSeq-UMI pipeline protocol

Lexogen QuantSeq-UMI pipeline is now available on Partek Flow

Lexogen has implemented the QuantSeq-UMI data analysis pipeline in Partek Flow software, providing kit users with a simple, streamlined tool for data analysis.

Venn diagram

Less is More: Detecting Differential Gene Expression in Single Cell RNA-Seq Analysis

There are many available tools from which to choose such as DESeq2 and limma, as well as classic statistical tests like ANOVA or Welch’s ANOVA. This post will discuss the frequent question of which to choose.

Visualizations in Step One of Single Cell Analysis

How to Perform Single Cell RNA Sequencing (scRNA-Seq): Exploratory Analysis

This is the first post in our new blog series: How to Perform Single Cell RNA Sequencing. This series will discuss each step of the analysis process.

Batch Remover for Single-Cell Data

We discuss the advantages of simultaneous gene and protein expression measurement.

tSNE chart & PCA from Partek Flow

Studying Immunotherapy with Multimodal Omics: Simultaneous Measurement of Gene and Protein Expression

We discuss the advantages of simultaneous gene and protein expression measurement.

Some of the visualizations in Partek Flow 8.0

Introducing Partek Flow 8.0

Learn about some of the new features and improvements in Partek Flow 8.0.

inDrop single cell machine by 1CellBio

1CellBio and Partek Deliver Easy-to-use Single Cell Analysis Solution

Dolomite Bio and Partek Collaborate on Single Cell Analysis Pipeline for Nadia Instrument

Visualizations in ChIP-Seq and RNA-Sew integration

How to Integrate ChIP-Seq and RNA-Seq Data

Let’s discuss how to make multi-omics integration analysis and integration seamless by bringing all your analysis tools and data together.

Nadia instrument by Dolomite Bio

Dolomite Bio and Partek Collaborate on Single Cell Analysis Pipeline for Nadia Instrument

Researchers of all backgrounds can now easily analyze data and gain unprecedented insights into the expression patterns of single cells.

Quantitative data analysis of whiskey

Enjoy Responsibly!

Using tasting results of 86 different Scotch malts, let’s explore how you can apply statistical tools to non-genomic data.

tCNE & PCA plots

To Boldly Go…

With the human genome being extensively described and studies of the proteome well under way, is the glycome is the final frontier?

tSNE & group biomarkers table

Get to Know Your Cell

Cells are sometimes mysterious and do not readily reveal their true identity. Here’s how to identify their biological nature.

Partek Flow on Amazon Cloud

Deployment of Partek^® Flow^® on Amazon Web Services by Quadrant Biosciences

Quadrant Biosciences discuss analyzing genomics data with Partek Flow on AWS.

DNA and RNA molecules

Lexogen and Partek Deliver QuantSeq Analysis Solution

Pipeline enables Lexogen customers to import raw sequencing files directly into Partek Flow to automate analysis and removes the analysis barrier.

Picture of Victor Martinez

How One Researcher Identified a Novel Cancer Prognostic Marker Using 6,260 Small Non-coding RNA Samples

Custom smRNA-Seq pipeline in Partek Flow to deduce expression of ~32,000 human piRNAs per sample.

stack of journals

Partek Celebrates Six Thousandth Citation

To celebrate, Partek reached out to the authors of the paper that brought them to this milestone to discuss their work.

Mosquito on human skin depicting Zika virus

Zika Research Advances Through Next Generation Sequencing

A key tool used in Zika virus research is next-generation sequencing due to its ability to deliver a hypothesis-free full molecular footprint in a time-efficient manner. Let’s see how.

Water bear image

Aliens Among Us: How I Analysed Non-Model Organism Data in Partek Flow

How well does Partek Flow software analyze non-model organism data, without having to deal with any command line tools?

Photo of Lesley Chang

Researchers Discover Potential Diagnostic Tool for Alzheimer’s Disease

Researchers set out to identify the disease-specific exosomal microRNA (miRNA) biomarkers associated with Alzheimer’s disease in serum using deep-sequencing technology.

instructor giving training

Partek Scientists Answered Over 15,000 Questions on NGS and Microarray Data Analysis From 120 Countries in 2015

In 2015 Partek scientists answered over 12,000 questions from researchers around the world and trained an additional 3,000 plus researchers.

Some wise words

A wild cry of exultation arose from the Heliumite squadron, and with redoubled ferocity they fell upon the Zodangan fleet. By a pretty maneuver two of the vessels of Helium gained a position above their adversaries, from which they poured upon them from their keel bomb batteries a perfect torrent of exploding bombs.

Good design is really good business.

Articles no less passionate than logical appeared on the question, for geography is one of the pet subjects of the English; and the columns devoted to Phileas Fogg’s venture were eagerly devoured by all classes of readers. At first some rash individuals, principally of the gentler sex, espoused his cause, which became still more popular when the Illustrated

There are always flowers for those who want to see them.

Articles no less passionate than logical appeared on the question, for geography is one of the pet subjects of the English; and the columns devoted to Phileas Fogg’s venture were eagerly devoured by all classes of readers. At first some rash individuals, principally of the gentler sex, espoused his cause, which became still more popular

In a wardrobe were many green dresses, made of silk and satin and velvet.

http://www.oxygenna.com

No time for games, let’s play

Since then he had been skulking along towards Maybury, in the hope of getting out of danger Londonward. People were hiding in trenches and cellars, and many of the survivors had made off towards Woking village and Send. He had been consumed with thirst until he found one of the water mains near the railway