Partek® Flow® is a start-to-finish software analysis solution for next generation sequencing data applications. It has an easy-to-use interface, robust statistical algorithms, information-rich visualizations, and cutting-edge genomic tools enabling researchers of all skill levels to confidently perform data analysis.
- All the tools you need to quickly go from raw data files to meaningful results within a single solution
- Enter the pipeline where it makes sense for you; raw data, aligned reads, count data, or normalized counts
- Explore data with interactive, customizable, and publication ready visualizations
Point-and-click
for ease of use
Scripting abilities for advanced users
Flexible installation options
Biologist
Don’t feel comfortable using command line? You don’t have to with Partek Flow. Simply point and click your way through your analysis. The data smart interface will present just the relevant options with easy-to-understand dialogs that explain the process as you go. You have all the power and tools of command line without the hassle.
Bioinformatician
Do you want the ability to add custom tools and parameters? You can do so using the User Added Task console. Simply write your script, save in a pipeline, and share. Others will be able to execute it on demand. Partek Flow offers all the advanced tools and user controls that bioinformaticians and system admins demand.
Enterprise
Are you an organization with diverse needs and geographic locations? Partek Flow offers the enterprise tools you need to store, manage, and collaboratively analyze large genomic data sets. Whether a cloud, cluster, or server deployment, it provides the elastic computing resources and flexibility to scale with ever-changing needs.
Partek Flow is Built for Ease of Use
Partek Flow has the tools, features, and easy-to-use interface that allows all researchers the ability to analyze genomic data.
Point-and-click
interface
Visually build custom analysis pipelines, then reuse and share
Information rich and
publication ready visualizations
Publicly available statistical algorithms with optimized settings
Collaborate without
transferring data
Queue analysis and
receive email updates
Robust and searchable online documentation
Access to local
scientific experts
Partek Flow has the Advanced Power and Flexibility Organizations Need
While Partek Flow has the ease of use that researchers desire, it also has the advanced tools, user administration controls, and flexible scaling abilities that labs and enterprise organizations demand.
Automatic, elastic scaling of computing resources
Configurable and savable parameters in all tools
Private/public cloud, server, or compute cluster installation
Strong data, security, and user access controls
Implement scripts in custom pipelines that others can execute
Re-prioritize tasks in the queue
Automated control through REST API
Audit trail that can be reviewed, shared, and downloaded
Tools in Partek Flow
Alignment
Differential analysis
Metagenomics
- Kraken
- Alpha and beta diversity
- Quantification at taxonomic levels
- Differential analysis at taxonomic levels
QA/QC reports
- Pre-alignment
- Post-alignment
- ERCC spike-in
- Single cell quality
Clustering
- Hierarchical
- K-means
- Graph-based
Data exploration
Variant calling
Variant annotation
Peak calling
Quantification
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