Deep-sequencing identification of the genomic targets of the cytidine deaminase AID and its cofactor RPA in B lymphocytes

| |
Yamane A, Resch W, Kuo N, Kuchen S, Li Z, Sun HW, Robbiani DF, McBride K, Nussenzweig MC, Casellas R. Deep-sequencing identification of the genomic targets of the cytidine deaminase AID and its cofactor RPA in B lymphocytes. Nat Immunol. 2011 Jan;12(1):62-9.

Analysis of genome-wide methylation and gene expression induced by 5-aza-2'-deoxycytidine identifies BCL2L10 as a frequent...

| |
Fabiani E, Leone G, Giachelia M, D'alo' F, Greco M, Criscuolo M, Guidi F, Rutella S, Hohaus S, Voso MT. Analysis of genome-wide methylation and gene expression induced by 5-aza-2'-deoxycytidine identifies BCL2L10 as a frequent methylation target in acute myeloid leukemia. Leuk Lymphoma. 2010 Dec;51(12):2275-84

Amplicon-dependent CCNE1 expression is critical for clonogenic survival after cisplatin treatment and is correlated with 20q11..

| |
Etemadmoghadam D, George J, Cowin PA, Cullinane C, Kansara M; Australian Ovarian Cancer Study Group, Gorringe KL, Smyth GK, Bowtell DD. Amplicon-dependent CCNE1 expression is critical for clonogenic survival after cisplatin treatment and is correlated with 20q11 gain in ovarian cancer. PLoS One. 2010 Nov 12;5(11):e15498

The regulation of miRNA-211 expression and its role in melanoma cell invasiveness

| |
Mazar J, DeYoung K, Khaitan D, Meister E, Almodovar A, Goydos J, Ray A, Perera RJ. The regulation of miRNA-211 expression and its role in melanoma cell invasiveness. PLoS One. 2010 Nov 1;5(11)

Transcriptome, methylome and genomic variations analysis of ectopic thyroid glands

| |
Abu-Khudir R, Paquette J, Lefort A, Libert F, Chanoine JP, Vassart G, Deladoëy J. Transcriptome, methylome and genomic variations analysis of ectopic thyroid glands. PLoS One. 2010 Oct 15;5(10)

Integrative and comparative genomics analysis of early hepatocellular carcinoma differentiated from liver regeneration in young

| |
Colak D, Chishti MA, Al-Bakheet AB, Al-Qahtani A, Shoukri MM, Goyns MH, Ozand PT, Quackenbush J, Park BH, Kaya N. Integrative and comparative genomics analysis of early hepatocellular carcinoma differentiated from liver regeneration in young and old. Mol Cancer. 2010 Jun 12;9:146.PMID: 20540791

Genomic and transcriptomic analyses distinguish classic Rett and Rett-like syndrome and reveals shared altered pathways

| |
Colak D, Al-Dhalaan H, Nester M, Albakheet A, Al-Younes B, Al-Hassnan Z, Al-Dosari M, Chedrawi A, Al-Owain M, Abudheim N, Al-Alwan L, Al-Odaib A, Ozand P, Inan MS, Kaya N. Genomic and transcriptomic analyses distinguish classic Rett and Rett-like syndrome and reveals shared altered pathways. Genomics. 2010 Oct 8.

Genetic analysis of the first reported solid tumour in Shwachman-Diamond Syndrome

| |
Choi, D., & Dror, Y. Genetic analysis of the first reported solid tumour in Shwachman-Diamond Syndrome. Poster presented at the Institute of Medical Science, University of Toronto, 2010 Undergraduate and International Summer Research Program, Research Day. August 2010, page 38.

Integrating the multiple dimensions of genomic and epigenomic landscapes of cancer

| |
Chari, R., Thu, K.L., Wilson, I.M., Lockwood, W.W., Lonergan, K.M., Coe, B.P., Malloff, C.A., Gazdar, A.F., Lam, S., Garnis, C., MacAulay, C.E., Alvarez, C.E., & Lam, W.L. Integrating the multiple dimensions of genomic and epigenomic landscapes of cancer. Cancer and Metastasis Reviews, 2010; 29(1):73-93. doi:10.1007/s10555-010-9199-2.

Integrated genomic profiling identifies candidate genes implicated in glioma-genesis and a novel LEO1-SLC12A1 fusion gene

| |
Bralten, L.B.C., Kloosterhof, N.K., Gravendeel, L.A.M., Sacchetti, A., Duijm, E.J., Kros, J.M., van den Bent, M.J., Hoogenraad, C.C., Sillevis Smitt, P.A.E., & French, P.J. Integrated genomic profiling identifies candidate genes implicated in glioma-genesis and a novel LEO1-SLC12A1 fusion gene. Genes, Chromosomes, and Cancer, 2010; 49(6):509-517. doi:10.1002/gcc.20760.