Multi-platform whole-genome microarray analyses refine the epigenetic signature of breast cancer metastasis with gene expression

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Andrews, J., Kennette, W., Pilon, J., Hodgson, A., Tuck, A.B., Chambers, A.F., & Rodenhiser, D.I. Multi-platform whole-genome microarray analyses refine the epigenetic signature of breast cancer metastasis with gene expression and copy number. PLoS One. 2010; 5(1):e8665.

A molecular portrait of gastrointestinal stromal tumors: an integrative analysis of gene expression profiling...

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Astolfi, A., Nannini, M., Abbondanza Pantaleo, M., Di Battista, M., Heinrich, M.C., Santini, D., Catena, F., Corless, C.L., Maleddu, A., Saponara, M., Lolli, C., Di Scioscio, V., Formica, S., & Biasco, G. A molecular portrait of gastrointestinal stromal tumors: an integrative analysis of gene expression profiling and high-resolution genomic copy number. Laboratory Investigation, 2010. doi:10.1038/labinvest.2010.110.

The reactive tumor microenvironment: MUC1 signaling directly reprograms transcription of CTGF

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Behrens, M.E., Grandgenett, P.M., Bailey, J.M., Singh, P.K., Yi, C-H., Yu, F., Hollingsworth, M.A. The reactive tumor microenvironment: MUC1 signaling directly reprograms transcription of CTGF. Oncogene, 2010. doi:10.1038/onc.2010.327.

Integrated genomic profiling identifies candidate genes implicated in glioma-genesis and a novel LEO1-SLC12A1 fusion gene

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Bralten, L.B.C., Kloosterhof, N.K., Gravendeel, L.A.M., Sacchetti, A., Duijm, E.J., Kros, J.M., van den Bent, M.J., Hoogenraad, C.C., Sillevis Smitt, P.A.E., & French, P.J. Integrated genomic profiling identifies candidate genes implicated in glioma-genesis and a novel LEO1-SLC12A1 fusion gene. Genes, Chromosomes, and Cancer, 2010; 49(6):509-517. doi:10.1002/gcc.20760.

Integrating the multiple dimensions of genomic and epigenomic landscapes of cancer

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Chari, R., Thu, K.L., Wilson, I.M., Lockwood, W.W., Lonergan, K.M., Coe, B.P., Malloff, C.A., Gazdar, A.F., Lam, S., Garnis, C., MacAulay, C.E., Alvarez, C.E., & Lam, W.L. Integrating the multiple dimensions of genomic and epigenomic landscapes of cancer. Cancer and Metastasis Reviews, 2010; 29(1):73-93. doi:10.1007/s10555-010-9199-2.

Genetic analysis of the first reported solid tumour in Shwachman-Diamond Syndrome

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Choi, D., & Dror, Y. Genetic analysis of the first reported solid tumour in Shwachman-Diamond Syndrome. Poster presented at the Institute of Medical Science, University of Toronto, 2010 Undergraduate and International Summer Research Program, Research Day. August 2010, page 38.

Normal colon epithelium: a dataset for the analysis of gene expression and alternative splicing events in colon disease

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Mojica, W. & Hawthorn, L. Normal colon epithelium: a dataset for the analysis of gene expression and alternative splicing events in colon disease. BMC Genomics 2010, 11:5. doi:10.1186/1471-2164-11-5.

Identification of oncogenic events in gastrointestinal stromal tumors (GISTs) by combined gene expression and copy number...

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Nannini, M., Pantaleo, M.A., Astolfi, A., Maleddu, A., Heinrich, M.C., Corless, C.L., di Battista, M., Catena, F., Santini, D., & Biasco, G. Identification of oncogenic events in gastrointestinal stromal tumors (GISTs) by combined gene expression and copy number analysis. Journal of Clinical Oncology, 2010 ASCO Annual Meeting Proceedings (Post-Meeting Edition), 2010, 28(15_suppl):10039.

Identification of Candidate Growth Promoting Genes in Ovarian Cancer through Integrated Copy Number and Expression Analysis

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Ramakrishna, M., Williams, L.H., Boyle, S.E., Bearfoot, J.L., Sridhar, A., Speed, T.P., Gorringe, K.L., & Campbell, I.G. Identification of Candidate Growth Promoting Genes in Ovarian Cancer through Integrated Copy Number and Expression Analysis. PLoS One. 2010; 5(4): e9983. doi: 10.1371/journal.pone.0009983.

The use of integrative genomics to define molecular signatures of melanoma histologic subtypes

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Rose, A.E., Poliseno, L., Pearlman, A., Wang, J., Ostrer, H., Darvishian, F., Shapiro, R.L., Pavlick, A.C., Hernando, E., & Osman, I. The use of integrative genomics to define molecular signatures of melanoma histologic subtypes. Journal of Clinical Oncology, 2010 ASCO Annual Meeting Proceedings (Post-Meeting Edition), 2010, 28(15_suppl):8553.