The Chlamydia trachomatis plasmid is a transcriptional regulator of chromosomal genes and a virulence factor

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Carlson, J.H., Whitmire, W.M., Crane, D.D., Wicke, L., Virtaneva, K., Sturdevant, D.E., Kupko, J.J. III, Porcella, S.F., Martinez-Orengo, N., Heinzen, R.A., Kari, L., & Caldwell, H.D. The Chlamydia trachomatis plasmid is a transcriptional regulator of chromosomal genes and a virulence factor. Infect. Immun., 2008. doi:10.1128/IAI.00102-08.

Identification of interleukin-13 related biomarkers using peripheral blood mononuclear cells

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Syed, F., Huang, C.C., Li, K., Liu, V., Shang, T., Amegadzie, B.Y., Griswold, D.E., Song, X-Y.R., & Li, L. Identification of interleukin-13 related biomarkers using peripheral blood mononuclear cells. Biomarkers 2007, 12(4): 414-423. doi:10.1080/13547500701192652.

Analysis of a multifactor microarray study using Partek Genomics Solution

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Downey, T. Analysis of a multifactor microarray study using Partek Genomics Solution. Methods of Enzymology 2006, 411: 256-270. DNA Microarrays, Part B: Databases and Statistics.

Transcriptome coexpression map of human embryonic stem cells

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Li, H., Liu, Y., Shin, S., Sun, Y., Loring, J.F., Mattson, M.P., Rao, M.S., Zhan, M. Transcriptome coexpression map of human embryonic stem cells. BMC Genomics, 2006, 7:103.

Molecular alterations in primary prostate cancer after androgen ablation therapy

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Best, C.J.M., Gillespie, J.W., Yi, Y., Chandramouli, G.V.R., Perlmutter, M.A., Gathright, Y., Erickson, H.S., Gorgevich, L., Tangrea, M.A., Duray, P.H., Gonzalez, S., Velasco, A., Linehan, W.M., Matusik, R.J., Price, D.K., Figg, W.D., Emmert-Buck, M.R., Chuaqui, R.F. Molecular alterations in primary prostate cancer after androgen ablation therapy. Clinical Cancer Research, 2005, 11: 6823-6834.

The future of Microarray technology: networking the genome search

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D’Ambrosio, C., Gatta, L., Bonini, S. The future of Microarray technology: Networking the genome search. Allergy, 2005, 60(10).

A newly discovered human alpha–globin gene

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Goh, S.H., Lee, Y.T., Bhanu, N.V., Cam, M.C., Desper, R., Martin, B.M., Moharram, R., German, R.B., Miller, J.L. A newly discovered human alpha–globin gene. Blood, 2005, 105(4), 1466-1472.

Increase signal and detect more genes on Affymetrix Arrays

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Johnson, C., Setterquist, R., Moturi, S., Agarwal, S., Whitley, P. (2005). Increase signal and detect more genes on Affymetrix® Arrays. Ambion® TechNotes 12(4).

Review: Navigating public microarray databases

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Penkett, C.J., Bahler, J. Review: Navigating public microarray databases. Comparative and Functional Genomics, 2005, 5(6-7), 471-479.

Use of a mixed tissue RNA design for performance assessments on multiple microarray formats

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Thompson, K., Rosenzweig, B., Pine, S., Retief, J., Turpaz, Y., Afshari, C., Hamadeh, H., Damore, M., Boedigheimer, M., Blomme, E., Ciurlionis, R., Warring, J., Fuscoe, J., Paules, R., Tucker, C., Fare, T., Coffey, E., He, Y., Collins, P., Jarnagin, K., Fujimoto, S., Ganter, B., Kiser, G., Kaysser-Kranich, T., Sina, J., Sistare, F. Use of a mixed tissue RNA design for performance assessments on multiple microarray formats. Nucleic Acids Research, 2005, 33(27):e187.