Partek^® GS for SNP Association Studies

Identify SNPs of Interest in Genotyping Data using Robust Statistical Methods

Partek GS supports single/multiple SNP association tests performed on allele, genotype, and dominant/recessive models. Confidently analyze your genotyping data using such statistical tests as Chi², Hardy-Weinberg Equilibrium, and Linkage Disequilibrium. Get accurate estimation of p-values in even the smallest datasets using Monte Carlo tests. Explore data with tabular analysis as well as visual analysis tools including frequency plots, biplots, and heat maps, which can be used to visualize linkage disequilibrium within the data.

Integrate Genotype Data with Copy Number and LOH Data

After identifying loci of interest, explore copy number and LOH data in the same region. Gene and SNP lists can be easily created and exported. Corresponding data can be seamlessly linked to and visualized with the mapping array data.

Try Partek Genomics Suite Free

We offer a free trial. Try it for your SNP data today!