Using Partek Genomics Suite for Alternative Splice Analysis

Detect Gene-Level, Exon-Level, and Alternative Splice Expression Patterns

Partek GS provides rigorous and easy-to-use statistical tests for differential expression of genes or exons, and a flexible and powerful statistical test to detect alternative splicing based on a powerful mixed model analyis of variance. In addition, the Partek^® Genome Browser can display exon-level events such as alternative splicing and differential expression.

Build & Validate Diagnostic & Prognostic Classifiers

The Automated Model Selection tool in Partek GS will find an optimal set of predictive genes or exons, the best classifier, and optimal tuning parameters to obtain the best prediction possible from your data.

Import & Normalization of High Density Arrays

Since simple pre-filtering to exclude low expressed probes or exons may ignore alternative splicing, Partek GS has been optimized to process and analyze all exons on the array at the probe level, exon level, or gene level -even on today’s standard desktop and laptop computers.

Try Partek Genomics Suite Free

We offer a free trial. Try it for your exon data today!