Partek^® GS for Copy Number Data

Identify Regions of Chromosomal Amplification/Deletion & LOH using Robust Statistical Methods

Partek GS statistical and visual features make it easy to detect, display, and report on regions of amplification or deletions on the genome. In addition, regions of interest that differ between drug responders and non-responders can be identified using proven statistical methods.

Integrate Regions of Copy Number Alterations & LOH to Gene and Exon Expression Data

After Partek GS identifies the regions of significant copy number change or LOH, gene lists can be created and exported, and corresponding gene or exon expression data can be seamlessly linked to the mapping array data.

Build & Validate Diagnostic & Prognostic Classifiers

The Automated Model Selection tool in Partek GS will find an optimal set of predictive genes, SNPs, or exons, the best classifier, and optimal tuning parameters to obtain the best prediction possible from your data. Using Partek’s Model Selection Tool, you can build accurate diagnostic or prognostic prediction models based on copy number, LOH, or raw SNP expression values.

Try Partek Genomics Suite Free

We offer a free trial. Try it for your copy number data today!