Ampliseq Transcriptome 21k
Pipeline for Ion AmpliSeq™ Transcriptome Human Gene Expression Research Panel for quantification, normalization and differential gene expression. This pipeline works with aligned reads coming from the Torrent Suite Software and the samples properly grouped with attributes in the Data tab. When running the pipeline, please choose the Assembly: Homo sapiens (human) - Ampliseq and Gene/feature annotation: AmpliSeq Transcriptome as the annotation model on the first step of the pipeline. You will also be asked to define the factors and the contrasts for statistical analysis.